Can you run comskip twice?

I have a custom script that does a number of things but one item it does is run comskip twice. I find the commercial removal for my Comcast recordings doesn’t work super well the first pass but the second pass does a really good job give or take a few commercials here and there that contain the station logo.

I’d like to remove this batch complexity and see if I could do the same thing thru MCEBuddy?